Comparative microbiome analysis using four different sequencing

methods for mock community samples and Crohn’s disease samples

Mock community sample data

Short read 16S V3-V4 amplicon sequencing

Short read shotgun metagenome sequencing 

Nanopore MinION full length 16S amplicon sequencing

Nanopore MinION rRNA operon amplicon sequencing

 

 

Crohn’s disease samples

 

Short read 16S V3-V4 amplicon sequencing

Short read shotgun metagenome sequencing

Nanopore MinION full length 16S amplicon sequencing 

Nanopore MinION rRNA operon amplicon sequencing